Microbial Clinical Atlas

Microbial Clinical Atlas

Microbiome Knowledge Base

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  • Released
  • Updated
  • April 10, 2026
  • May 14, 2026
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Microbial Clinical Atlas (MCA) is a free, offline clinical microbiology reference for clinicians and researchers. Browse curated taxon passports covering taxonomy, biology, ecology, metabolites, clinical associations, and evidence-graded literature. A. PASSPORTS • Search and browse 60+ curated microbial taxon passports • Detailed clinical profiles: pathobiont status, AMR highlights, virulence factors, bloom triggers, and more • Evidence-graded clinical associations linked to PubMed • Bookmark taxa for quick access B. ADVANCED SEARCH • Search KEGG pathways, taxa, and diseases from a unified search bar • Explore pathway–taxon–disease relationships with cross-navigation • View linked compounds, drugs, and co-occurring taxa C. ON-DEVICE AI EXTRACTOR (OPTIONAL) • Scan papers you find interesting and suggest them to our curation team • Runs entirely on your device with Gemma 4 by Google • Nothing leaves your phone unless you tap Send in Mail • Requires an iPhone 15 Pro or newer D. PRIVACY-FIRST • All data is stored offline on your device • No account required, no tracking, no analytics Developed and maintained by the Bioinformatics Hub (https://TheBioHub.ca/).
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What's New in Microbial Clinical Atlas

1.2

May 14, 2026

We're excited to introduce the new on-device AI Extractor — scan papers you find interesting and contribute to MCA. It runs entirely on your phone with Gemma 4 by Google, so nothing leaves your device unless you choose to share. Requires iPhone 15 Pro or newer. Thank you for being part of MCA!

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