Visualize the 3D structures of molecules using data from PubChem and Protein Data Bank. Explore molecules in various viewing modes and download an extensive library of compounds.




197+ iOS apps & games curated and reviewed
If you already know Molecule Simulator, this is the deeper bench. 197+ molecule simulator apps and games for iPhone, all reviewed and ranked by user rating, recency, and download trend as of July 2026.
| # | App | Price | Rating | Ads | In-App Purchases | Updated |
|---|---|---|---|---|---|---|
| 1 | Free | 4.3★ (24) | No | No | Jul 2026 | |
| 2 | Free | 3.6★ (166) | No | No | Jul 2026 | |
| 3 | Free | — | Yes | Yes | May 2026 | |
| 4 | Free | 4.3★ (375) | Yes | Yes | Jul 2026 | |
| 5 | Free | 4.5★ (2.4K) | No | No | Jul 2026 | |
| 6 | Free | 4.0★ (40) | No | Yes | May 2026 | |
| 7 | Free | 3.8★ (90) | No | Yes | May 2026 | |
| 8 | Free | 4.0★ (10) | No | No | May 2026 |




Visualize the 3D structures of molecules using data from PubChem and Protein Data Bank. Explore molecules in various viewing modes and download an extensive library of compounds.





Explore and interact with 3D molecular models on your device. Rotate, zoom, and pan structures using intuitive touch gestures. Visualize molecules in different modes and load custom structures from various sources.







Build and manage your own urban empire by making strategic decisions. Expand your territory, serve customers, and upgrade your operations to achieve virtual success. This simulation game offers idle progression and real-time strategy elements.


Experience realistic driving with a collection of Mercedes AMG cars. Explore diverse environments, customize your vehicles inside and out, and even walk around the game world as one of 11 characters. Enjoy speed driving and offroad adventures.


Create and explore 3D molecular structures, visualize chemical properties, and access extensive chemical databases. This tool is ideal for students and educators needing on-the-go access to molecular information and computational chemistry resources.


Explore chemistry and physics through immersive virtual reality simulations and interactive labs. This app transforms learning complex scientific concepts into an engaging and entertaining experience, perfect for students and educators.


This app allows users to create and share chemical structures with ease. It calculates molecular formula, weight, and elemental composition in real-time as you draw. Ideal for students and researchers needing a simple tool for molecular visualization.


Create and view 3D molecular models with an intuitive editor. Supports various elements, bond types, and conformations, with undo/redo functionality. Share your creations easily via messaging and email.


Combine elements to discover new ones in this endless puzzle game. Our AI generates logical results for each combination, allowing you to explore thousands of unique creations. Sort and reset your discoveries, with a helpful solver for tricky recipes.


Explore and interact with 3D molecular models in an immersive chemistry learning experience. Scale, rotate, and move models while discovering properties and fun facts. Ideal for students and educators.


Experience a full life from birth to death, making choices that shape your destiny. Navigate childhood, build a career, explore relationships, and even delve into the underworld or hunt monsters. Every decision creates a unique story.


Build complex molecules by launching atoms at target sites. Utilize gyroscopic aiming and learn chemical formulas through engaging gameplay. Discover over 30 accurate 3D molecular models.


Explore a unique interactive simulation of a viscous, glowing substance. Manipulate its properties by stirring or treating it gently to create dynamic visual effects and even shape it. Supports real-time warping of photos, images, and video on compatible devices.


Explore the inner workings of animal, plant, and bacteria cells in a 3D interactive environment. Tap on cellular components to learn their names and functions. Rotate and zoom to get a comprehensive understanding of cellular biology.


Explore interactive 3D models of molecules, proteins, and DNA. This educational tool allows users to manipulate structures, experiment with visualization styles, and learn about chemical properties. Ideal for students and science enthusiasts of all ages.


Create and optimize 3D molecular models. This free software allows users to design molecules and refine their geometry simultaneously. A more advanced desktop version is also available.


This app provides a powerful offline chemical process simulation tool. It allows engineers to build complex process models, perform thermodynamic calculations, and analyze various unit operations. Features include a touch-enabled PFD interface, extensive compound databases, and advanced calculation engines.


This interactive tool combines a physical modeling set with a digital app to teach chemistry concepts. It allows users to explore molecules hands-on, understand bonding forces, and discover relationships between molecular structure and properties. Designed to make chemistry more engaging and accessible for students.


Experiment with elements, powders, and chemical reactions in a virtual sandbox. Mix, create, and discover new materials through realistic physics and chemistry simulations. Build landscapes or watch them crumble in this ultimate playground for scientific exploration.